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2000
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1999
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How stable is stable? Function versus community composition. Appl. Environ. Microbiol.
65:3697-3704.
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Construction and characterization of two recombinant bacteria that grow on ortho- and
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Lenski, R.E. 1999. Evolution, theory and experiments. In: J. Lederberg, editor.
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halorespiratory physiology. Appl. Environ. Microbiol. 65:4049-4056.
Lopez, F.A., J. Manglicmot, T.M. Schmidt, C. Yeh, H.V. Smith, D.A. Relman. 1999.
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Maltseva, O.V., T.V. Tsoi, J.F. Quensen III, M. Fukuda and J.M. Tiedje. 1999.
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Marsh, T.L. 1999. Terminal restriction fragment length polymorphism (T-RFLP): an
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53:386-394.
Nüsslein, K. and J.M. Tiedje. 1999. Soil bacterial community shift correlated with
change from forest to pasture vegetation in a tropical soil. Appl. Environ. Microbiol.
65:3622-3626.
Papadopoulos, D., D. Schneider, J. Meier-Eiss, W. Arber, R.E. Lenski, and M. Blot.
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Sepulveda-Torres, L. del C., N. Rajendran, M.J. Dybas and C.S. Criddle. 1999.
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Skubal, K.L., S.K. Haack, L.J. Forney, and P. Adriaens. 1999. Effects of Dynamic
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Song, B., M.M. Haggblom, J. Zhou, J.M. Tiedje and N.J. Palleroni. 1999. Taxonomic
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Tiedje, J.M. and J.L. Stein. 1999. Microbial Biodiversity: Strategies for its recovery.
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Tiedje, J.M., S. Asuming-Brempong, K. Nusslein, T.L. Marsh and S.J. Flynn. 1999.
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Thorn, R.G., J.-M. Moncalvo, R. Vigalys and C.A. Reddy. 1999. Phylogenetic analyses
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Tsoi, T.V., E.G. Plotnikova, J.R. Cole, W.F. Guerin, M. Bagdasarian and J.M. Tiedje.
1999. Cloning, expression, and nucleotide sequence of the Pseudomonas aeruginosa 142
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Microbiol. 65:2151-2162.
Vasi, F.K., and R.E. Lenski. 1999. Ecological strategies and fitness tradeoffs in
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Velicer, G.J. 1999. Pleiotropic effects of bacterial adaptation to a single carbon source for
growth on alternative substrates. Appl. Environ. Microbiol. 65:264-269.
Velicer, G.J., and R.E. Lenski. 1999. Evolutionary tradeoffs under conditions of
resource abundance and scarcity: experiments with bacteria. Ecology 80:1168-1179.
Velicer, G., T.M. Schmidt and R.E. Lenski. 1999. Application of traditional and
phylogenetic comparative methods to test for a tradeoff in bacterial growth rates at low
versus high substrate concentration. Microbial Ecology (In Press).
Vulic, M., R.E. Lenski, and M. Radman. 1999. Mutation, recombination and incipient
speciation of bacteria in the laboratory. Proceedings of the National Academy of Sciences,
USA 96:7348-7351.
Wall, D.B., D.M. Lubman and S.J. Flynn. 1999. Rapid profiling of induced proteins in
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Witt, M.E., M.J. Dybas, R.M. Worden and C.S. Criddle. 1999. Motility-enhanced
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Ye, D., J.F. Quensen, III, J.M. Tiedje and S.A. Boyd. 1999. 2-Bromoethanesulfonate,
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polychlorobiphenyls by pasteurized microorganisms. Appl. Environ. Microbiol. 65:327-
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1998
Albrecht, I.D., A.L. Barkovskii, and P. Adriaens. 1998. Stimulation of PCDD
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Stockholm Sweden.
Bratina, B.J., B. Stevenson, W. J. Green and T.M. Schmidt. 1998.
Manganese reduction by microbes from oxic regions of the Lake Vanda
(Antarctica) water column. Applied and Environmental Microbiology
64: 3791-3797.
Bruns, M.A., M.A. Fries, J.M. Tiedje and E.A. Paul. 1998. Functional gene
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302.
Buckley, D.H., J.R. Graber and T.M. Schmidt. 1998. Phylogenetic analysis
of nonthermophilic Crenarchaeota and their diversity and abundance in
soils. Applied and Environmental Microbiology 64: 3781-3787.
Button, D.K., B.R. Robertson, L. Pinto, P.W. Lepp and T.M. Schmidt.
1998. A high affinity, small, dilute, extinction-culture isolate
having kinetic constants compatible with growth at ambient
concentrations of dissolved nutrients in seawater. Applied and
Environmental Microbiology 64:4467-4476.
Dazzo, F.B., Y.G. Yanni, A. Squartini, P. Mateos, F. de Bruijn, T. Schmidt, J.K. Ladha,
B. Rolfe, and A. Hartmann. 1998. Natural beneficial association of Rhizobium
leguminosarum bv. trifolii and rice roots and its relevance to sustainable agriculture. In: C.
Elmerich, A. Kondorosi, and W. Newton (eds), Biological Nitrogen Fixation for the 21st
Century. pp. 627-628, Kluwer Academic Publishers, Dordrecht.
Dedysh, S.N., N.S. Panikov, W. Liesack, R. Grobkopf, J. Zhou and J.M. Tiedje. 1998.
Isolation of acidophilic methane-oxidizing bacteria from Northern peat wetlands. Science
282:281-284.
Dedysh, S.N., N.S. Panikov and J.M. Tiedje. 1998. Acidophilic
methanotrophic communities from Sphagnum peat bogs.
Appl. Environ. Microbiol. 64:922-929.
Dybas, M.J., M. Barcelona, S. Bezborodnikov, S. Davies, L. Forney, H. Heuer, O.
Kawka, T. Mayotte, L. Sepulveda-Torres, K. Smalla, M. Sneathen, J. Tiedje, T. Voice,
D.C. Wiggert, M.E. Witt and C.S. Criddle. 1998. Pilot-scale evaluation of
bioaugmentation for in-situ remediation of a carbon tetrachloride-contaminated aquifer.
Environ. Sci. Technol. 32:3598-3611.
Fulthorpe, R.R., A.N. Rhodes and J.M. Tiedje. 1998. High levels of
endemicity apparent in 3-chlorobenzoate degrading soil bacteria. Appl.
Environ. Microbiol. (IN Press).
Huberty, L.E., K.L. Gross, and C.J. Miller. 1998. Effects of nitrogen addition on
successional dynamics and diversity in Michigan old-fields. J. Ecol. 86:794-803.
Jackson, J.H., R. George, H.O. Adeyemi, M.A. Winrow, P.A. Herring, J.J.
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Kim, K. S., T. G. Lilburn, M. J. Renner and J. A. Breznak. 1998. arfI and
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Leadbetter, J. R., L. D. Crosby and J. A. Breznak. 1998.
Methanobrevibacter filiformis sp. nov., a filamentous methanogen from
termite hindguts. Arch. Microbiol. 169:287-292.
Lendvay, J.M., S.M. Dean and P. Adriaens. 1998. Temporal and spatial trends in
biogeochemical conditions at a groundwater-surface water interface: implications for natural
bioattenuation. Environ. Sci. Technol. 32:3472-3478.
Lendvay, J.M., W.A. Sauck, M.L. McCormick, M.J. Barcelona, D.H. Kampbell, J.T.
Wilson, and P. Adriaens. 1998. Geophysical characterization, redox zonation, and
contaminant distribution at a groundwater-surface water interface. Wat. Resour. Res.
34:3545-3559.
Lenski, R.E. 1998. Bacterial evolution and the cost of antibiotic resistance. International
Microbiology 1:265-270.
Lenski, R.E., J.A. Mongold, P.D. Sniegowski, M. Travisano, F. Vasi, P.J.
Gerrish, and T.M. Schmidt. 1998. Evolution of competitive fitness in
experimental populations of E. coli: What makes one genotype a better
competitor than another? Antonie van Leeuwenhoek 73:35-47.
Lepp, P.W. and T.M. Schmidt. 1998. Nucleic acid content of
Synechococcus spp. during growth in continuous light and light:dark
cycles. Archives of Microbiology 170:201-207.
Liu, W-T, T.L. Marsh, and L.J. Forney. 1998. Determination of microbial diversity of
anaerobic-aerobic activated sludge by a novel molecular biological technique. Proceedings
Second International Conference on Microorganisms in Activated Sludge and Biofilm
Processes. Wat. Sci. Tech. 37.
Lopez, F.A. J. Manglicmot, T.M. Schmidt, C. Yeh, H.V. Smith, D.A. Relman.
1998. Molecular characterization of Cyclospora-like organisms
from baboons. Journal of Infectious Diseases. In Press.
Lynam, M., J. Damborsky, M. Kuty, and P. Adriaens. 1998. Molecular orbital
calculations to probe mechanism of reductive dechlorination of polychlorinated dioxins.
Environ. Toxicol. Chem. 17(6):998-1005.
McGowan, C., R. Fulthorpe, A. Wright and J.M. Tiedje. 1998. Evidence for interspecies
gene transfer in the evolution of 2,4-dichlorophenoxyacetic acid degraders. Appl. Environ.
Microbiol. 64:4089-4092.
Moyer, C.L., J.M. Tiedje, F.C. Dobbs and D.M. Karl. 1998. Diversity of
deep-sea hydrothermal vent Archaea at Loihi Seamount, Hawaii.
Deep Sea Research (In Press).
Nuesslein, K. and J.M. Tiedje. 1998. Characterization of the dominant
and rare members of a young soil bacterial community with small-subunit
ribosomal DNA amplified from DNA fractionated on the basis of its
guanine and cytosine composition. Appl. Environ. Microbiol. (In Press).
Princic, A., I. Mahne, F. Megusar, E.A. Paul and J.M. Tiedje. 1998. Effects of pH and
oxygen and ammonium concentrations on the community structure of nitrifying bacteria
from wastewater. Appl. Environ. Microbiol. 64:3584-3590.
Renner, M. J. and J. A. Breznak. 1998. Purification and properties of
ArfI, an a-L-arabinofuranosidase from Cytophaga xylanolytica. Appl.
Environ. Microbiol. 64:43-52.
Santo Domingo, J.W., M.G. Kaufman, M.J. Klug, W.E. Holben, D. Harris
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of the bacterial hindgut community of crickets. Molec. Ecol. (In Press)
Santo Domingo, J.W., M.G. Kaufman, M.J. Klug and J. M. Tiedje. 1998.
Characterization of the cricket hindgut microbiota using rRNA-targeting probes.
Appl. Environ. Microbiol. (In Press).
Stevenson, B. and T.M. Schmidt. 1998. Growth rate dependent
accumulation of RNA from plasmid-borne ribosomal RNA operons. Journal of
Bacteriology 180:1970-1972.
van Elsas, J.D., B.B. McSpadden Gardner, A.C. Wolters and E. Smit. 1998.
Isolation, characterization, and transfer of cryptic gene-mobilizing palsmids
in the wheat rhizoshere. Appl. Environ. Microbiol. 64:880-889.
Velicer, G.J., L. Kroos, and R.E. Lenski. 1998. Loss of social behaviors by
Myxococcus xanthus during evolution in an unstructured habitat. Proceedings of the
National Academy of Sciences, USA 95:12376-12380.
Wischnak, C., F. E. Löffler, J. Li, J. W. Urbance, and R. Müller. 1998. Isolation and
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1997
Bratina, B.J., M. Viebahn, and T.M. Schmidt. 1997. Achieving
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T. Hattori, D. Hawksworth, C. Klopatek, P. Lavelle, D. Malloch, J. Rusek,
B. Soderstrom, J.M. Tiedje and R.A. Virginia. 1997. Biodiversity and
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